Baked Spinach Mushroom Quesadillas are a delicious twist on the traditional stovetop version, offering a healthier preparation method that creates perfectly crispy tortillas with minimal effort. These quesadillas combine earthy mushrooms, nutrient-packed spinach, and gooey melted cheese for a vegetarian meal that’s both satisfying and flavorful. The oven-baking technique ensures even cooking and allows you to make multiple servings simultaneously.
Why You’ll Love This Recipe
- Healthier than traditional pan-fried quesadillas with less oil needed
- The oven-baking method allows you to make multiple quesadillas at once, perfect for family meals
- Vegetarian-friendly while still being hearty and satisfying
- Customizable with different cheese blends and vegetable additions
- Crispy exterior and perfectly melted cheese interior every time
Ingredients
- Spinach: Fresh spinach adds vibrant color, nutrients, and a mild flavor that pairs perfectly with mushrooms. You can substitute with frozen spinach (thawed and drained) in a pinch.
- Mushrooms: Any variety works well – cremini for earthiness, white button for mildness, or portobello for meatier texture. Slice them evenly for consistent cooking.
- Olive Oil: Used for sautéing the vegetables. You can substitute with avocado oil or butter for different flavor profiles.
- Garlic Powder: Provides concentrated garlic flavor without the risk of burning. Fresh minced garlic can be used instead if you prefer.
- Onion Powder: Adds savory depth without the texture of chopped onions. For more texture, substitute with finely diced fresh onion sautéed with the mushrooms.
- Dried Thyme: Optional herb that complements mushrooms beautifully. Rosemary or oregano can be excellent alternatives.
- Cheese: A good melting cheese is essential – cheddar for sharpness, mozzarella for stretch, or use a Mexican blend for authentic flavor.
- Flour Tortillas: Large-sized tortillas work best for folding. Whole wheat tortillas can be substituted for added fiber.
- Salt and Pepper: Essential for seasoning the vegetable filling to perfection.
- Cooking Spray/Olive Oil: For brushing the quesadillas before baking to achieve that golden-brown crispiness.
Variations
Mediterranean Style
Transform these quesadillas with Mediterranean flavors by adding chopped artichoke hearts, a sprinkle of feta cheese, and substituting the thyme with dried oregano. Before serving, drizzle with a little balsamic glaze for an extra flavor dimension.
Spicy Mexican
Give these quesadillas a kick by adding diced jalapeños or green chilies to the vegetable mixture. Use a Mexican cheese blend and add a teaspoon of taco seasoning to the vegetables while cooking. Serve with fresh pico de gallo and guacamole.
Breakfast Quesadillas
Turn this into a morning meal by adding scrambled eggs to the spinach and mushroom mixture. Use breakfast-friendly cheeses like cheddar or Gruyère, and consider adding a few pieces of crumbled bacon for additional flavor. Serve with hot sauce and a dollop of sour cream.
How to Make the Recipe
Step 1: Prepare the Vegetables
Begin by heating olive oil in a skillet over medium heat. Add the sliced mushrooms and cook until they release their moisture and begin to brown, about 5 minutes. Stir occasionally to ensure even cooking. Add the chopped spinach to the skillet and cook until it wilts down completely, which should take about 2 minutes. Season the mixture with garlic powder, onion powder, dried thyme (if using), salt, and pepper, then stir to combine all flavors. Remove the skillet from heat and allow the mixture to cool slightly.
Step 2: Assemble the Quesadillas
Preheat your oven to 400°F (200°C) and line a baking sheet with parchment paper or lightly grease it. Lay out your tortillas on a clean work surface. On one half of each tortilla, sprinkle a layer of shredded cheese, followed by an even portion of the spinach and mushroom mixture. Top with another layer of cheese (the double cheese layer ensures proper sealing and maximum gooeyness). Carefully fold the empty half of the tortilla over the filling, creating a half-moon shape.
Step 3: Bake to Perfection
Transfer the assembled quesadillas to your prepared baking sheet. Lightly brush the tops with olive oil or cooking spray to promote browning. Place the baking sheet in the preheated oven and bake for 10-12 minutes until the tortillas turn golden brown and crispy, and the cheese inside is completely melted. For extra crispiness, carefully flip the quesadillas halfway through baking time. Once done, remove from the oven and let them rest for a minute or two before cutting into wedges.

Tips for Making the Recipe
- Cook out as much moisture from the mushrooms as possible to prevent soggy quesadillas
- Don’t overload the tortillas with filling – a thin, even layer works best for proper cooking
- For extra flavor, add a thin layer of cream cheese or herbed cream cheese spread before adding the other fillings
- Ensure the oven is fully preheated before baking for the crispiest results
- For a quick shortcut, use pre-washed spinach and pre-sliced mushrooms
- If the tortillas are browning too quickly but the cheese isn’t fully melted, lower the oven temperature and cover loosely with foil
How to Serve
Serve these Baked Spinach Mushroom Quesadillas hot from the oven, cut into triangular wedges for easy handling. They pair perfectly with a variety of dipping options – try salsa, guacamole, or sour cream for traditional accompaniments. For a complete meal, serve alongside a simple green salad dressed with vinaigrette or a cup of tomato soup. These quesadillas make an excellent lunch, light dinner, or cut them smaller for appetizers at your next gathering. For an elevated presentation, garnish with fresh cilantro, sliced green onions, or a sprinkle of paprika.
Make Ahead
These quesadillas are perfect for meal prep and can be prepared in several ways ahead of time. The spinach and mushroom filling can be cooked up to 3 days in advance and stored in an airtight container in the refrigerator. For partially prepared quesadillas, assemble them completely, then wrap individually in plastic wrap and refrigerate for up to 24 hours before baking. You can also freeze the assembled (unbaked) quesadillas by placing them on a baking sheet until frozen solid, then transferring to freezer bags where they’ll keep for up to 3 months. Bake frozen quesadillas at 375°F for 15-20 minutes until heated through and crispy.
FAQs
Can I make these quesadillas gluten-free?
Yes, simply substitute the regular flour tortillas with your favorite gluten-free tortillas. Just be aware that some gluten-free tortillas may be less flexible, so handle them carefully when folding. The rest of the ingredients in this recipe are naturally gluten-free, but always check your cheese packaging to ensure there are no additives containing gluten.
How can I make these quesadillas vegan?
These quesadillas can easily be made vegan by substituting the regular cheese with your favorite plant-based cheese alternative that melts well. Brands like Daiya, Violife, or Follow Your Heart work particularly well in quesadillas. Ensure the vegan cheese is well-incorporated with the vegetables for the best melting results.
How do I prevent my quesadillas from getting soggy?
The key to crispy quesadillas is managing moisture. Make sure to cook the mushrooms long enough to evaporate their natural moisture, and thoroughly drain the spinach after wilting. Additionally, allow the filling to cool slightly before assembling to prevent steam from being trapped inside the tortilla. Baking on a preheated baking sheet can also help crisp the bottom of the quesadillas.
Can I use corn tortillas instead of flour tortillas?
While traditional quesadillas often use flour tortillas because they fold easily without breaking, you can use corn tortillas for a different flavor profile. However, corn tortillas are smaller and less flexible, so instead of folding them, use two tortillas to make a sandwich with the filling in between. They may also require a slightly shorter baking time, so keep an eye on them to prevent burning.
Conclusion
These Baked Spinach Mushroom Quesadillas offer a perfect balance of convenience, nutrition, and incredible flavor. The combination of earthy mushrooms, vibrant spinach, and melty cheese wrapped in a crispy tortilla creates a satisfying meal that’s sure to become a regular in your recipe rotation. Whether you’re looking for a quick weeknight dinner, a crowd-pleasing appetizer, or a vegetarian option that doesn’t sacrifice flavor, these oven-baked quesadillas deliver on all fronts. Try them today and discover your new favorite way to enjoy this Mexican-inspired classic!

Baked Spinach Mushroom Quesadillas
- Total Time: 25 minutes
- Yield: 4 servings 1x
- Diet: Vegetarian
Description
These crispy baked spinach mushroom quesadillas offer a healthier twist on the classic Mexican favorite. The savory combination of earthy mushrooms, nutrient-rich spinach, and melted cheese creates a satisfying vegetarian meal that’s perfect for lunch or a quick dinner.
Ingredients
- 2 cups fresh spinach, chopped
- 1 cup mushrooms, sliced (any variety you prefer)
- 1 tablespoon olive oil
- 1/2 teaspoon garlic powder
- 1/2 teaspoon onion powder
- 1/4 teaspoon dried thyme (optional)
- 1 cup shredded cheese (cheddar, mozzarella, or a blend)
- 4 large flour tortillas
- Salt and pepper, to taste
- Cooking spray or extra olive oil for brushing
Instructions
- Preheat Oven: Heat your oven to 400°F (200°C). This temperature will ensure your quesadillas get nicely crisp on the outside while allowing the cheese to melt perfectly inside. Make sure the oven is fully preheated before placing your quesadillas inside.
- Cook Vegetables: Heat the olive oil in a skillet over medium heat. Add the sliced mushrooms and cook until they begin to soften and release their moisture, about 5 minutes, stirring occasionally. Next, add the chopped spinach and continue cooking until it wilts completely, approximately 2 minutes. Season the mixture with garlic powder, onion powder, dried thyme (if using), salt, and pepper. Stir well to incorporate all the flavors, then remove from heat and set aside.
- Assemble Quesadillas: Lay out 2 tortillas on a baking sheet lined with parchment paper or a lightly greased baking sheet. On one half of each tortilla, sprinkle a portion of the shredded cheese, creating a base layer. Evenly distribute the cooked spinach and mushroom mixture over the cheese. Add another layer of shredded cheese on top of the vegetables to help hold everything together when melted. Fold the empty half of each tortilla over to cover the filling, creating a half-moon shape.
- Bake: Lightly brush the tops of the quesadillas with cooking spray or a thin layer of olive oil to help them crisp up in the oven. Place the baking sheet in the preheated oven and bake for 10-12 minutes, or until the tortillas turn golden brown and the cheese inside is completely melted and bubbly. You may want to flip them halfway through for even browning.
- Serve: Remove the quesadillas from the oven and let them cool for 1-2 minutes before handling. This brief resting period allows the cheese to set slightly and makes cutting easier. Using a sharp knife or pizza cutter, slice each quesadilla into 2-3 wedges and serve while still warm. These quesadillas pair wonderfully with salsa, sour cream, guacamole, or your favorite dipping sauce.
Notes
- For a crispier texture, you can lightly toast the tortillas in a dry skillet before filling them.
- Add jalapeños or red pepper flakes for a spicy kick.
- These quesadillas can be made ahead and reheated in a 350°F oven for 5-7 minutes.
- For a gluten-free option, use corn tortillas or gluten-free flour tortillas.
- Try adding black beans for extra protein and fiber.
- Prep Time: 10 minutes
- Cook Time: 15 minutes
- Category: Main-course
- Method: Baking
- Cuisine: Mexican-inspired
Nutrition
- Serving Size: 1 quesadilla
- Calories: 320
- Sugar: 2g
- Sodium: 480mg
- Fat: 16g
- Saturated Fat: 7g
- Unsaturated Fat: 8g
- Trans Fat: 0g
- Carbohydrates: 30g
- Fiber: 3g
- Protein: 12g
- Cholesterol: 30mg